PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941123.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 334aa    MW: 38965.7 Da    PI: 6.5102
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941123.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.12.8e-5671361129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeelv++yL+kk+++kk++l +vik+vd+y++ePwdL++  ++ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++
  XP_010941123.1   7 VPPGFRFHPTDEELVNYYLRKKMASKKIDL-DVIKDVDLYRIEPWDLQEkcRIGTeEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPI 100
                     69****************************.9***************953444442556************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +s k++l+g++ktLvfy+grap+g+k+dW+mheyrle
  XP_010941123.1 101 YS-KHNLIGMRKTLVFYQGRAPNGQKSDWIMHEYRLE 136
                     **.899*****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.68E-625156IPR003441NAC domain
PROSITE profilePS5100560.3597156IPR003441NAC domain
PfamPF023659.5E-298135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MDTFSHVPPG FRFHPTDEEL VNYYLRKKMA SKKIDLDVIK DVDLYRIEPW DLQEKCRIGT  60
EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKPI YSKHNLIGMR KTLVFYQGRA  120
PNGQKSDWIM HEYRLETNEN APPQEEGWVV CRVFKKRVPT VRKASELESP CWYDEQVSIM  180
QDQLDFQNRI AIQTNMTYHQ HLQSYKGETK MHYHLPHEPF HQLPQLESPK LPNYINHGSS  240
LQCFTTSEDK TVQPSHQLQM ITFYNSSGDI DQAVEQVTDW RVLDKFVASQ LSHDISKGPE  300
YSDAVDVLQV SDTQEVAVEY ASTSTSSCQI DLLK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-52615714169Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010941123.10.0PREDICTED: NAC domain-containing protein 7-like
SwissprotQ9FWX21e-130NAC7_ARATH; NAC domain-containing protein 7
TrEMBLA0A0G2UF561e-173A0A0G2UF56_MUSPR; Vascular related NAC-domain protein 3
STRINGGSMUA_Achr7P06640_0011e-172(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23703892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-112NAC 007